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maximum likelihood model implemented in the mega6 program  (MEGA Inc)

 
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    MEGA Inc maximum likelihood model implemented in the mega6 program
    Maximum Likelihood Model Implemented In The Mega6 Program, supplied by MEGA Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega6+program/mega+5+0+software/pm26566850-56-43-44
    Average 90 stars, based on 1 article reviews
    maximum likelihood model implemented in the mega6 program - by Bioz Stars, 2026-10
    90/100 stars

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    Article Title: Analysis of mitochondrial protein-coding genes of Antheraea assamensis: Muga silkworm of Assam.
    Article Snippet: Scientific editing by Yonggyun Kim.. Abstract To understand the synonymous codon usage pattern in mitochondrial genome of Antheraea assamensis, we analyzed the 13 mitochondrial protein‐coding genes of this species using a bioinformatic approach as no work was reported yet.. The nucleotide composition analysis suggested that the percentages of A, T, G,and C were 33.73, 46.39, 9.7 and 10.17, respectively and the overall GC content was 19.86, that is, lower than 50% and the genes were AT rich.

    Article Title: Complete mitochondrial genome and phylogenic analysis of the mudskipper Scartelaos gigas (Perciformes, Gobiidae).
    Article Snippet: In this paper, the complete mitochondrial genome sequence of Scartelaos gigas was firstly determined.. The circular genome (16 717 bp) comprises 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control region.. The overall base composition of S. gigas is 28.9% for C, 28.3% for A, 26.4% for T, 16.4% for G, with a slight A + T bias of 54.7%.

    Software:

    Article Title: Next generation sequencing yields the complete mitochondrial genome of the largescale mullet, Liza macrolepis (Teleostei: Mugilidae).
    Article Snippet: In this study, the complete mitogenome sequence of largescale mullet (Teleostei: Mugilidae) has been sequenced by the next-generation sequencing method.. The assembled mitogenome, consisting of 16,832 bp, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 22 transfer RNAs, two ribosomal RNAs genes, and a non-coding control region of D-loop.. D-loop which has a length of 1094 bp is located between tRNA-Pro and tRNA-Phe.

    Construct:

    Article Title: Next generation sequencing yields the complete mitochondrial genome of the largescale mullet, Liza macrolepis (Teleostei: Mugilidae).
    Article Snippet: In this study, the complete mitogenome sequence of largescale mullet (Teleostei: Mugilidae) has been sequenced by the next-generation sequencing method.. The assembled mitogenome, consisting of 16,832 bp, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 22 transfer RNAs, two ribosomal RNAs genes, and a non-coding control region of D-loop.. D-loop which has a length of 1094 bp is located between tRNA-Pro and tRNA-Phe.

    Derivative Assay:

    Article Title: Next generation sequencing yields the complete mitochondrial genome of the largescale mullet, Liza macrolepis (Teleostei: Mugilidae).
    Article Snippet: In this study, the complete mitogenome sequence of largescale mullet (Teleostei: Mugilidae) has been sequenced by the next-generation sequencing method.. The assembled mitogenome, consisting of 16,832 bp, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 22 transfer RNAs, two ribosomal RNAs genes, and a non-coding control region of D-loop.. D-loop which has a length of 1094 bp is located between tRNA-Pro and tRNA-Phe.



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    Image Search Results


    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).

    Journal: Plant Physiology

    Article Title: Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation 1

    doi: 10.1104/pp.17.00673

    Figure Lengend Snippet: The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).

    Article Snippet: Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program ( Tamura et al., 2013 ).

    Techniques: Construct, Generated, Software